There are a multitude of goals in breeding chickens. One is to have healthy productive vigorous birds. Another is to breed “perfect” birds, i.e. birds that meet the standard of perfection. These two goals are quite distinct, and the methods to achieve them are necessarily different. Furthermore, they are largely incompatible.
Breeding to standard, I can see, necessitates inbreeding. Inbreeding invariably results, on average, in reduced vigour, productivity, size, fertility – the list goes on. A little inbreeding affects these traits a little; a high level of inbreeding can have a large effect. The only way to reduce the effects of inbreeding is to cull heavily. This means killing large numbers of chicks and young birds. It also means not allowing the parents of defective chicks to mate again, since they have proven to both carry a defective gene.
Heavy culling may also be important when outcrossing if your objective is the “perfect” bird, but for very different reasons. And the culls from an outcrossing are likely to be perfectly nice healthy productive birds that could add colour and diversity to someone’s backyard flock, even if their down colour or leg feathering don’t conform to someone’s idea of “perfection”.
Back to inbreeding. Inbreeding is, quite simply, mating among relatives. The progeny are then referred to as inbred. Non-inbred individuals are referred to as outcrossed.
All animals carry a number of deleterious recessive alleles at a number of gene loci. A deleterious recessive allele is a gene that, if an animal has two copies of it, will be expressed and show a negative (sometimes lethal) trait. If an animal has only one copy, there will be no visible effect.
Inbreeding is a continuum, and the level of inbreeding is calculated as the inbreeding coefficient, F, which is the probability that the two alleles at a locus are identical by decent (IBD). Inbreeding increases the probability of offspring carrying two IBD alleles at any given locus. F ranges from 0 (outcrossed; from the mating of two unrelated birds) to 1 (where every gene locus carries identical alleles on each of the two paired chromosomes). Mating of birds that are not only inbred but related to each other increases the value of F (and accentuates the effects of inbreeding). In practice of course F is never truly 0, because all chooks are related way back there, and it’s never going to be 1, either. But it’s the concept that matters. The calculation of the inbreeding coefficient is rather mathematical.
Inbreeding WILL result in the expression of deleterious alleles, at a higher rate than outcrossing. This is why inbreeding gets bad press, and is not generally recommended, in people. Even Christianity reflects this in its ban on marrying close relatives. Think about all those bad “cousin” jokes.
The expression of deleterious alleles is either good, if you see it as a way of identifying birds that carry deleterious alleles so that you can remove the carriers from the gene pool, or bad, if you expect most of your chicks to grow up to be normal productive chickens (as some “breeders” do, and then sell them to unsuspecting purchasers). Culls from inbreeding programs should not be foisted on the unsuspecting public.
Having said all that, with a methodical, intensive, and long term breeding program, including test matings and horrifyingly heavy culling levels, these deleterious genes can be removed from the breeding population, one by one. Once you’ve got them out, you can, in theory, inbreed to your heart’s content.
This process is not for the faint of heart however, and probably not for anyone who thinks that all life is worthy of consideration and respect.
If you don’t follow this process, then inbreeding will eventually bring woes.
Apparently someone is breeding lavender orpingtons out this way. I recently visited a woman who proudly showed me her lavender orp. The bird was, admittedly, a beautiful colour. But the poor thing could barely walk; and had multiple physical defects. I am 99% certain the bird was highly inbred, and that the breeder hadn’t culled heavily in the breeding program.
Anyhow, don’t take my word for any of this stuff; read the literature. And I don’t mean laymen’s writings on poultry sites, I mean scientific, peer-reviewed research. The inescapable conclusion is that inbreeding, on its own, has bad consequences.